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  1. IGB
  2. IGBF-60

Session files are saving toolbar icons, please remove this if possible for the 8.2 release

        Details

        • Type: Bug
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          1
        • Sprint:
          Sprint 9

          Description

          Overview: Session files save too much metadata that is not associated with the biological data. Some of this data includes tooltips, hotkeys, and other state data that is not necessary.

          This story should include reviewing the session import/export functionality and creating stories and estimates for the work which will be needed to refactor this system.

            Attachments

              Issue Links

              blocks

              New Feature - A new feature of the product, which has yet to be developed. IGBF-55 Loading previous sessions are not loading tracks in user defined order

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed
              relates to

              Bug - A problem which impairs or prevents the functions of the product. HELP-18 Ghost DAS and Save Session by name (Dr. Joana Mendes)

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

              Support - HELP-47 IGB crashes on light session with A. Thal and bed file - Joana

              • Major - Major loss of function.
              • Closed

              Support - HELP-50 IGB Problems - Joana Mendes

              • Major - Major loss of function.
              • Closed

              Improvement - An improvement or enhancement to an existing feature or task. DB-68 Upgrade the Session Saving feature (ex. save track order)

              • Major - Major loss of function.
              • In Progress

                Activity

                Descending order - Click to sort in ascending order
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                mason Mason Meyer (Inactive) added a comment - - edited

                Testing verifies that keystroke changes and changes to the toolbar are not conserved when saving an IGB session file. = expected.

                Also, there is no longer an exception being generated (see other comment).

                This story has been resolved and will now be closed.

                Show
                mason Mason Meyer (Inactive) added a comment - - edited Testing verifies that keystroke changes and changes to the toolbar are not conserved when saving an IGB session file. = expected. Also, there is no longer an exception being generated (see other comment). This story has been resolved and will now be closed.
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                dcnorris David Norris (Inactive) added a comment -

                bugs fixed on igb_8_2 branch

                Show
                dcnorris David Norris (Inactive) added a comment - bugs fixed on igb_8_2 branch
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                mason Mason Meyer (Inactive) added a comment -

                Exception in thread "AWT-EventQueue-2" java.lang.IllegalStateException: Node has been removed.
                at java.util.prefs.AbstractPreferences.get(Unknown Source)
                at com.affymetrix.igb.prefs.KeyStrokeEditPanel.isCommandInUse(KeyStrokeEditPanel.java:140)
                at com.affymetrix.igb.prefs.KeyStrokeEditPanel.access$500(KeyStrokeEditPanel.java:36)
                at com.affymetrix.igb.prefs.KeyStrokeEditPanel$2.keyPressed(KeyStrokeEditPanel.java:93)
                at java.awt.AWTEventMulticaster.keyPressed(Unknown Source)
                at java.awt.AWTEventMulticaster.keyPressed(Unknown Source)
                at java.awt.Component.processKeyEvent(Unknown Source)
                at javax.swing.JComponent.processKeyEvent(Unknown Source)
                at java.awt.Component.processEvent(Unknown Source)
                at java.awt.Container.processEvent(Unknown Source)
                at java.awt.Component.dispatchEventImpl(Unknown Source)
                at java.awt.Container.dispatchEventImpl(Unknown Source)
                at java.awt.Component.dispatchEvent(Unknown Source)
                at java.awt.KeyboardFocusManager.redispatchEvent(Unknown Source)
                at java.awt.DefaultKeyboardFocusManager.dispatchKeyEvent(Unknown Source)
                at java.awt.DefaultKeyboardFocusManager.preDispatchKeyEvent(Unknown Source)
                at java.awt.DefaultKeyboardFocusManager.typeAheadAssertions(Unknown Source)
                at java.awt.DefaultKeyboardFocusManager.dispatchEvent(Unknown Source)
                at java.awt.Component.dispatchEventImpl(Unknown Source)
                at java.awt.Container.dispatchEventImpl(Unknown Source)
                at java.awt.Window.dispatchEventImpl(Unknown Source)
                at java.awt.Component.dispatchEvent(Unknown Source)
                at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
                at java.awt.EventQueue.access$200(Unknown Source)
                at java.awt.EventQueue$3.run(Unknown Source)
                at java.awt.EventQueue$3.run(Unknown Source)
                at java.security.AccessController.doPrivileged(Native Method)
                at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
                at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
                at java.awt.EventQueue$4.run(Unknown Source)
                at java.awt.EventQueue$4.run(Unknown Source)
                at java.security.AccessController.doPrivileged(Native Method)
                at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
                at java.awt.EventQueue.dispatchEvent(Unknown Source)
                at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
                at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
                at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
                at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
                at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
                at java.awt.EventDispatchThread.run(Unknown Source)
                Exception in thread "AWT-EventQueue-2" java.lang.IllegalStateException: Node has been removed.
                at java.util.prefs.AbstractPreferences.get(Unknown Source)
                at com.affymetrix.igb.prefs.KeyStrokeEditPanel.isCommandInUse(KeyStrokeEditPanel.java:140)
                at com.affymetrix.igb.prefs.KeyStrokeEditPanel.access$500(KeyStrokeEditPanel.java:36)
                at com.affymetrix.igb.prefs.KeyStrokeEditPanel$2.keyPressed(KeyStrokeEditPanel.java:93)
                at java.awt.AWTEventMulticaster.keyPressed(Unknown Source)
                at java.awt.AWTEventMulticaster.keyPressed(Unknown Source)
                at java.awt.Component.processKeyEvent(Unknown Source)
                at javax.swing.JComponent.processKeyEvent(Unknown Source)
                at java.awt.Component.processEvent(Unknown Source)
                at java.awt.Container.processEvent(Unknown Source)
                at java.awt.Component.dispatchEventImpl(Unknown Source)
                at java.awt.Container.dispatchEventImpl(Unknown Source)
                at java.awt.Component.dispatchEvent(Unknown Source)
                at java.awt.KeyboardFocusManager.redispatchEvent(Unknown Source)
                at java.awt.DefaultKeyboardFocusManager.dispatchKeyEvent(Unknown Source)
                at java.awt.DefaultKeyboardFocusManager.preDispatchKeyEvent(Unknown Source)
                at java.awt.DefaultKeyboardFocusManager.typeAheadAssertions(Unknown Source)
                at java.awt.DefaultKeyboardFocusManager.dispatchEvent(Unknown Source)
                at java.awt.Component.dispatchEventImpl(Unknown Source)
                at java.awt.Container.dispatchEventImpl(Unknown Source)
                at java.awt.Window.dispatchEventImpl(Unknown Source)
                at java.awt.Component.dispatchEvent(Unknown Source)
                at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
                at java.awt.EventQueue.access$200(Unknown Source)
                at java.awt.EventQueue$3.run(Unknown Source)
                at java.awt.EventQueue$3.run(Unknown Source)
                at java.security.AccessController.doPrivileged(Native Method)
                at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
                at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
                at java.awt.EventQueue$4.run(Unknown Source)
                at java.awt.EventQueue$4.run(Unknown Source)
                at java.security.AccessController.doPrivileged(Native Method)
                at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
                at java.awt.EventQueue.dispatchEvent(Unknown Source)
                at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
                at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
                at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
                at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
                at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
                at java.awt.EventDispatchThread.run(Unknown Source)

                Show
                mason Mason Meyer (Inactive) added a comment - Exception in thread "AWT-EventQueue-2" java.lang.IllegalStateException: Node has been removed. at java.util.prefs.AbstractPreferences.get(Unknown Source) at com.affymetrix.igb.prefs.KeyStrokeEditPanel.isCommandInUse(KeyStrokeEditPanel.java:140) at com.affymetrix.igb.prefs.KeyStrokeEditPanel.access$500(KeyStrokeEditPanel.java:36) at com.affymetrix.igb.prefs.KeyStrokeEditPanel$2.keyPressed(KeyStrokeEditPanel.java:93) at java.awt.AWTEventMulticaster.keyPressed(Unknown Source) at java.awt.AWTEventMulticaster.keyPressed(Unknown Source) at java.awt.Component.processKeyEvent(Unknown Source) at javax.swing.JComponent.processKeyEvent(Unknown Source) at java.awt.Component.processEvent(Unknown Source) at java.awt.Container.processEvent(Unknown Source) at java.awt.Component.dispatchEventImpl(Unknown Source) at java.awt.Container.dispatchEventImpl(Unknown Source) at java.awt.Component.dispatchEvent(Unknown Source) at java.awt.KeyboardFocusManager.redispatchEvent(Unknown Source) at java.awt.DefaultKeyboardFocusManager.dispatchKeyEvent(Unknown Source) at java.awt.DefaultKeyboardFocusManager.preDispatchKeyEvent(Unknown Source) at java.awt.DefaultKeyboardFocusManager.typeAheadAssertions(Unknown Source) at java.awt.DefaultKeyboardFocusManager.dispatchEvent(Unknown Source) at java.awt.Component.dispatchEventImpl(Unknown Source) at java.awt.Container.dispatchEventImpl(Unknown Source) at java.awt.Window.dispatchEventImpl(Unknown Source) at java.awt.Component.dispatchEvent(Unknown Source) at java.awt.EventQueue.dispatchEventImpl(Unknown Source) at java.awt.EventQueue.access$200(Unknown Source) at java.awt.EventQueue$3.run(Unknown Source) at java.awt.EventQueue$3.run(Unknown Source) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.awt.EventQueue$4.run(Unknown Source) at java.awt.EventQueue$4.run(Unknown Source) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.awt.EventQueue.dispatchEvent(Unknown Source) at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source) at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source) at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source) at java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.awt.EventDispatchThread.run(Unknown Source) Exception in thread "AWT-EventQueue-2" java.lang.IllegalStateException: Node has been removed. at java.util.prefs.AbstractPreferences.get(Unknown Source) at com.affymetrix.igb.prefs.KeyStrokeEditPanel.isCommandInUse(KeyStrokeEditPanel.java:140) at com.affymetrix.igb.prefs.KeyStrokeEditPanel.access$500(KeyStrokeEditPanel.java:36) at com.affymetrix.igb.prefs.KeyStrokeEditPanel$2.keyPressed(KeyStrokeEditPanel.java:93) at java.awt.AWTEventMulticaster.keyPressed(Unknown Source) at java.awt.AWTEventMulticaster.keyPressed(Unknown Source) at java.awt.Component.processKeyEvent(Unknown Source) at javax.swing.JComponent.processKeyEvent(Unknown Source) at java.awt.Component.processEvent(Unknown Source) at java.awt.Container.processEvent(Unknown Source) at java.awt.Component.dispatchEventImpl(Unknown Source) at java.awt.Container.dispatchEventImpl(Unknown Source) at java.awt.Component.dispatchEvent(Unknown Source) at java.awt.KeyboardFocusManager.redispatchEvent(Unknown Source) at java.awt.DefaultKeyboardFocusManager.dispatchKeyEvent(Unknown Source) at java.awt.DefaultKeyboardFocusManager.preDispatchKeyEvent(Unknown Source) at java.awt.DefaultKeyboardFocusManager.typeAheadAssertions(Unknown Source) at java.awt.DefaultKeyboardFocusManager.dispatchEvent(Unknown Source) at java.awt.Component.dispatchEventImpl(Unknown Source) at java.awt.Container.dispatchEventImpl(Unknown Source) at java.awt.Window.dispatchEventImpl(Unknown Source) at java.awt.Component.dispatchEvent(Unknown Source) at java.awt.EventQueue.dispatchEventImpl(Unknown Source) at java.awt.EventQueue.access$200(Unknown Source) at java.awt.EventQueue$3.run(Unknown Source) at java.awt.EventQueue$3.run(Unknown Source) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.awt.EventQueue$4.run(Unknown Source) at java.awt.EventQueue$4.run(Unknown Source) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source) at java.awt.EventQueue.dispatchEvent(Unknown Source) at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source) at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source) at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source) at java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.awt.EventDispatchThread.pumpEvents(Unknown Source) at java.awt.EventDispatchThread.run(Unknown Source)
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                mason Mason Meyer (Inactive) added a comment -

                *A bug was found while testing:

                After I "Save an IGB Session" and then attempt to update a keystroke within the Preferences panel, an exception is generated (see comment below).

                This bug should be fixed before closing the issue so I am moving the story back into the To-Do column.

                Show
                mason Mason Meyer (Inactive) added a comment - *A bug was found while testing: After I "Save an IGB Session" and then attempt to update a keystroke within the Preferences panel, an exception is generated (see comment below). This bug should be fixed before closing the issue so I am moving the story back into the To-Do column.
                Hide
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                tkanapar Tarun Santosh (Inactive) added a comment -

                Removed toolbar and keystroke.

                commit 12884fbfca6620ae6c2bd6090ae4cc2f30a95b0c
                Author: tkanapar <tkanapar@uncc.edu>
                Date: Thu Nov 13 16:18:30 2014 -0500

                Show
                tkanapar Tarun Santosh (Inactive) added a comment - Removed toolbar and keystroke. commit 12884fbfca6620ae6c2bd6090ae4cc2f30a95b0c Author: tkanapar <tkanapar@uncc.edu> Date: Thu Nov 13 16:18:30 2014 -0500

                  People

                  • Assignee:
                    mason Mason Meyer (Inactive)
                    Reporter:
                    kyle Kyle Suttlemyre (Inactive)
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    3 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: