Details
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Type:
Improvement
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Epic Link:
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Sprint:Sprint 23
Description
In IGBF-673 we decided that the default sorting of chromosomes in the current genome tab should be defined by the order seen in the genome.txt file.
While this is a good temporary solution, this may not be the best implementation. In the future we should change this to most logical order for users which would be starting with Chr1, then Chr2, Chr3, etc.
After the numbered chromosomes are listed appropriately we should then list the chromsomes with letters ("ChrX, ChrY, ChrC, ChrM").
After that we should include all of the "weird chromosomes" which there are often a lot of (for example "chr15_KI270905v1_alt").
At the end we should include "Genome" (and I think this should be capitalized).
Attachments
Issue Links
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-440 [ 15498 ] |
| Attachment | ChromsomesVSgenometxt.PNG [ 13044 ] | |
| Sprint | Backlog Grooming Meeting [ 29 ] |
| Summary | IGB should sort chromsomes from "Chr1, Chr2, Chr3,...ChrX,ChrY,ChrC,....etc." | IGB should sort chromosomes from "Chr1, Chr2, Chr3,...ChrX,ChrY,ChrC,....etc." |
| Rank | Ranked higher |
| Sprint | Backlog Grooming Meeting [ 29 ] | Backlog Grooming Meeting 2 [ 30 ] |
| Resolution | Done [ 10000 ] | |
| Status | Open [ 1 ] | Closed [ 6 ] |
| Workflow | Loraine Lab Workflow [ 15990 ] | Fall 2019 Workflow Update [ 19512 ] |
| Workflow | Fall 2019 Workflow Update [ 19512 ] | Revised Fall 2019 Workflow Update [ 21629 ] |