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  1. IGB
  2. IGBF-695

IGB should sort chromosomes from "Chr1, Chr2, Chr3,...ChrX,ChrY,ChrC,....etc."

        Details

        • Type: Improvement
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
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          Description

          In IGBF-673 we decided that the default sorting of chromosomes in the current genome tab should be defined by the order seen in the genome.txt file.

          While this is a good temporary solution, this may not be the best implementation. In the future we should change this to most logical order for users which would be starting with Chr1, then Chr2, Chr3, etc.

          After the numbered chromosomes are listed appropriately we should then list the chromsomes with letters ("ChrX, ChrY, ChrC, ChrM").

          After that we should include all of the "weird chromosomes" which there are often a lot of (for example "chr15_KI270905v1_alt").

          At the end we should include "Genome" (and I think this should be capitalized).

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              Improvement - An improvement or enhancement to an existing feature or task. IGBF-673 Chromsomes may not be sorting correctly under the Current Genome Tab for D. rerio

              • Major - Major loss of function.
              • Closed

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                  • Assignee:
                    Unassigned
                    Reporter:
                    mason Mason Meyer (Inactive)
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                    • Created:
                      Updated:
                      Resolved: