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  1. IGB
  2. IGBF-796

Local species.txt is parsed incorrectly

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          Description

          While testing I noticed that the common name for "Bos taurus" (which is cow) was not appearing in its tooltip when hovering over the genome in the Current Genome tab.

          David helped me look into this and determined that this indicates that the local species.txt is being parsed incorrectly and should be fixed in the near future.

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              relates to

              Task - A task that needs to be done. IGBF-839 Prepare IGB 8.4.2 Minor Release

              • Major - Major loss of function.
              • Closed

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                mason Mason Meyer (Inactive) added a comment -

                Hey David, I am still noticing some weird species names listed under the Species dropdown in IGB, such as, "balAcu", "C_sativa_dh", "calMil", and other similar names. Is this an indication that the species.txt file is still being parsed incorrectly?

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                mason Mason Meyer (Inactive) added a comment - Hey David, I am still noticing some weird species names listed under the Species dropdown in IGB, such as, "balAcu", "C_sativa_dh", "calMil", and other similar names. Is this an indication that the species.txt file is still being parsed incorrectly?
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                dcnorris David Norris (Inactive) added a comment - - edited

                Please see https://jira.transvar.org/browse/IGBF-810, you can test again since this issue is also resolved.

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                dcnorris David Norris (Inactive) added a comment - - edited Please see https://jira.transvar.org/browse/IGBF-810 , you can test again since this issue is also resolved.
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                mason Mason Meyer (Inactive) added a comment -

                My testing verifies that this issue is resolved so it will now be closed.

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                mason Mason Meyer (Inactive) added a comment - My testing verifies that this issue is resolved so it will now be closed.
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                mason Mason Meyer (Inactive) added a comment -

                It seems like the common name for Camelina, which is "false flax", is not appearing in the tooltip when hovering over the species so this should be examined further.

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                mason Mason Meyer (Inactive) added a comment - It seems like the common name for Camelina, which is "false flax", is not appearing in the tooltip when hovering over the species so this should be examined further.
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                dcnorris David Norris (Inactive) added a comment -

                fixed

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                dcnorris David Norris (Inactive) added a comment - fixed

                  People

                  • Assignee:
                    jeckstein John Eckstein (Inactive)
                    Reporter:
                    mason Mason Meyer (Inactive)
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                    • Created:
                      Updated:
                      Resolved: