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  1. IGB
  2. IGBF-877

Opening a graph track from the Available Data pane causes an exception

        Details

        • Type: Bug
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:

          Description

          This exception was seen when trying to open a graph track from the Available Data pane:

          13:06:56.663 ERROR c.a.genometry.thread.CThreadWorker - com.affymetrix.genoviz.glyph.FillRectGlyph cannot be cast to com.affymetrix.genoviz.glyph.EfficientLabelledGlyph
          java.lang.ClassCastException: com.affymetrix.genoviz.glyph.FillRectGlyph cannot be cast to com.affymetrix.genoviz.glyph.EfficientLabelledGlyph
          at com.affymetrix.igb.view.layout.FasterExpandPacker.pack(FasterExpandPacker.java:144) ~[na:na]
          at com.affymetrix.igb.view.layout.GraphFasterExpandPacker.pack(GraphFasterExpandPacker.java:25) ~[na:na]
          at com.affymetrix.genoviz.bioviews.Glyph.pack(Glyph.java:710) ~[na:na]
          at com.affymetrix.igb.view.factories.AbstractTierGlyph.pack(AbstractTierGlyph.java:660) ~[na:na]
          at com.affymetrix.igb.view.factories.TransformTierGlyph.pack(TransformTierGlyph.java:44) ~[na:na]
          at com.affymetrix.igb.glyph.DefaultTierGlyph.pack(DefaultTierGlyph.java:183) ~[na:na]
          at com.affymetrix.igb.view.TrackView.addTierFor(TrackView.java:272) ~[na:na]
          at com.affymetrix.igb.view.TrackView.addEmptyTierFor(TrackView.java:231) ~[na:na]
          at com.affymetrix.igb.view.load.GeneralLoadView$3.runInBackground(GeneralLoadView.java:549) ~[na:na]
          at com.affymetrix.genometry.thread.CThreadWorker.doInBackground(CThreadWorker.java:73) ~[na:na]
          at javax.swing.SwingWorker$1.call(Unknown Source) [na:1.8.0_45]
          at java.util.concurrent.FutureTask.run(Unknown Source) [na:1.8.0_45]
          at javax.swing.SwingWorker.run(Unknown Source) [na:1.8.0_45]
          at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) [na:1.8.0_45]
          at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) [na:1.8.0_45]
          at java.lang.Thread.run(Unknown Source) [na:1.8.0_45]

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              mason Mason Meyer (Inactive) added a comment -

              To test this issue I verified that graph tracks could be opened from the Available Data pane and that there was no exception generated.

              Since this issue is resolved it will now be closed.

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              mason Mason Meyer (Inactive) added a comment - To test this issue I verified that graph tracks could be opened from the Available Data pane and that there was no exception generated. Since this issue is resolved it will now be closed.

                People

                • Assignee:
                  mason Mason Meyer (Inactive)
                  Reporter:
                  mason Mason Meyer (Inactive)
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                  Dates

                  • Created:
                    Updated:
                    Resolved: