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  1. IGB
  2. IGBF-877

Opening a graph track from the Available Data pane causes an exception

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:

      Description

      This exception was seen when trying to open a graph track from the Available Data pane:

      13:06:56.663 ERROR c.a.genometry.thread.CThreadWorker - com.affymetrix.genoviz.glyph.FillRectGlyph cannot be cast to com.affymetrix.genoviz.glyph.EfficientLabelledGlyph
      java.lang.ClassCastException: com.affymetrix.genoviz.glyph.FillRectGlyph cannot be cast to com.affymetrix.genoviz.glyph.EfficientLabelledGlyph
      at com.affymetrix.igb.view.layout.FasterExpandPacker.pack(FasterExpandPacker.java:144) ~[na:na]
      at com.affymetrix.igb.view.layout.GraphFasterExpandPacker.pack(GraphFasterExpandPacker.java:25) ~[na:na]
      at com.affymetrix.genoviz.bioviews.Glyph.pack(Glyph.java:710) ~[na:na]
      at com.affymetrix.igb.view.factories.AbstractTierGlyph.pack(AbstractTierGlyph.java:660) ~[na:na]
      at com.affymetrix.igb.view.factories.TransformTierGlyph.pack(TransformTierGlyph.java:44) ~[na:na]
      at com.affymetrix.igb.glyph.DefaultTierGlyph.pack(DefaultTierGlyph.java:183) ~[na:na]
      at com.affymetrix.igb.view.TrackView.addTierFor(TrackView.java:272) ~[na:na]
      at com.affymetrix.igb.view.TrackView.addEmptyTierFor(TrackView.java:231) ~[na:na]
      at com.affymetrix.igb.view.load.GeneralLoadView$3.runInBackground(GeneralLoadView.java:549) ~[na:na]
      at com.affymetrix.genometry.thread.CThreadWorker.doInBackground(CThreadWorker.java:73) ~[na:na]
      at javax.swing.SwingWorker$1.call(Unknown Source) [na:1.8.0_45]
      at java.util.concurrent.FutureTask.run(Unknown Source) [na:1.8.0_45]
      at javax.swing.SwingWorker.run(Unknown Source) [na:1.8.0_45]
      at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) [na:1.8.0_45]
      at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) [na:1.8.0_45]
      at java.lang.Thread.run(Unknown Source) [na:1.8.0_45]

        Attachments

          Activity

          mason Mason Meyer (Inactive) created issue -
          mason Mason Meyer (Inactive) made changes -
          Field Original Value New Value
          Epic Link IGBF-439 [ 15497 ]
          mason Mason Meyer (Inactive) made changes -
          Rank Ranked higher
          mason Mason Meyer (Inactive) made changes -
          Status Open [ 1 ] Testing In Progress [ 10003 ]
          mason Mason Meyer (Inactive) made changes -
          Assignee Tarun Mall [ tmall ] Mason Meyer [ mason ]
          mason Mason Meyer (Inactive) made changes -
          Resolution Done [ 10000 ]
          Status Testing In Progress [ 10003 ] Closed [ 6 ]
          jeckstein John Eckstein (Inactive) made changes -
          Resolution Done [ 10000 ]
          Status Closed [ 6 ] Open [ 1 ]
          jeckstein John Eckstein (Inactive) made changes -
          Labels Track_View
          jeckstein John Eckstein (Inactive) made changes -
          Resolution Done [ 10000 ]
          Status Open [ 1 ] Closed [ 6 ]
          ann.loraine Ann Loraine made changes -
          Workflow Loraine Lab Workflow [ 16287 ] Fall 2019 Workflow Update [ 19616 ]
          ann.loraine Ann Loraine made changes -
          Workflow Fall 2019 Workflow Update [ 19616 ] Revised Fall 2019 Workflow Update [ 21735 ]

            People

            • Assignee:
              mason Mason Meyer (Inactive)
              Reporter:
              mason Mason Meyer (Inactive)
            • Votes:
              0 Vote for this issue
              Watchers:
              1 Start watching this issue

              Dates

              • Created:
                Updated:
                Resolved: