Details
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Type: Improvement
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Status: Closed (View Workflow)
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Priority: Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:
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Sprint:Sprint 26
Description
Some gene models in IGB may contain multiple stop codons. These gene models will not fail when attempting to run an IPS search on them in ProtAnnot.
Instead of marking the gene model's IPS status as "Failure" in the IPS tab we should include something more descriptive to show the user that it is not a limitation of ProtAnnot, but instead a limitation of IPS.
Maybe something like, "Not valid: Translation contains multiple stop codons."
Discuss other types of validation of gene models before sending to IPS and add error handling.