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  1. IGB
  2. IGBF-947

Shift amino acid overlay in Prot Annot exons slightly to the right

        Details

        • Type: Improvement
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:

          Description

          Prot Annot now shows the amino acid overlay in exons on a striped background.

          This is good but I think the amino acid overlay should be shifted a tiny bit to the right so that the letters do not partially intersect with the strip boundaries (see attached screenshot).

            Attachments

              Issue Links

              relates to

              Improvement - An improvement or enhancement to an existing feature or task. IGBF-923 Change how the nucleotide and amino acid single-letter codes are displayed in ProtAnnot

              • Major - Major loss of function.
              • Closed

                Activity

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                mason Mason Meyer (Inactive) created issue -
                mason Mason Meyer (Inactive) made changes -
                Field Original Value New Value
                Epic Link IGBF-594 [ 15667 ]
                mason Mason Meyer (Inactive) made changes -
                Link This issue relates to IGBF-923 [ IGBF-923 ]
                tmall Tarun Mall (Inactive) made changes -
                Status Open [ 1 ] In Progress [ 3 ]
                tmall Tarun Mall (Inactive) made changes -
                Status In Progress [ 3 ] Pull Request Submitted [ 10101 ]
                jeckstein John Eckstein (Inactive) made changes -
                Status Pull Request Submitted [ 10101 ] Needs Testing [ 10002 ]
                jeckstein John Eckstein (Inactive) made changes -
                Assignee Tarun Mall [ tmall ] Mason Meyer [ mason ]
                mason Mason Meyer (Inactive) made changes -
                Status Needs Testing [ 10002 ] Testing In Progress [ 10003 ]
                dcnorris David Norris (Inactive) made changes -
                Sprint Sprint 26 [ 34 ]
                dcnorris David Norris (Inactive) made changes -
                Sprint Sprint 27 [ 35 ]
                dcnorris David Norris (Inactive) made changes -
                Rank Ranked higher
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                mason Mason Meyer (Inactive) added a comment -

                Testing for this issue consisted of simply checking to make sure that the amino acid overlay was shifted a tiny bit to the right and that ProtAnnot's and IGB's amino acid overlays looked the same. I also checked to make sure the amino acid sequence lines up correctly.

                I did notice that IGB allows the user to zoom in further than ProtAnnot does. This can cause the amino acid overlays to look a bit different but at the same zoom level they are the same.

                Since this issue is resolved it will now be closed.

                Show
                mason Mason Meyer (Inactive) added a comment - Testing for this issue consisted of simply checking to make sure that the amino acid overlay was shifted a tiny bit to the right and that ProtAnnot's and IGB's amino acid overlays looked the same. I also checked to make sure the amino acid sequence lines up correctly. I did notice that IGB allows the user to zoom in further than ProtAnnot does. This can cause the amino acid overlays to look a bit different but at the same zoom level they are the same. Since this issue is resolved it will now be closed.
                mason Mason Meyer (Inactive) made changes -
                Resolution Done [ 10000 ]
                Status Testing In Progress [ 10003 ] Closed [ 6 ]
                ann.loraine Ann Loraine made changes -
                Workflow Loraine Lab Workflow [ 16365 ] Fall 2019 Workflow Update [ 19667 ]
                ann.loraine Ann Loraine made changes -
                Workflow Fall 2019 Workflow Update [ 19667 ] Revised Fall 2019 Workflow Update [ 21786 ]

                  People

                  • Assignee:
                    mason Mason Meyer (Inactive)
                    Reporter:
                    mason Mason Meyer (Inactive)
                  • Votes:
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                    Watchers:
                    1 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: