Uploaded image for project: 'Bug Repository'
  1. Bug Repository
  2. BUG-845 Handle multiple CDS in gff3
  3. BUG-864

problem with reading gff3 file

          Details

          • Type: Sub-task
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None

            Description

            The attached file is output from GMAP, a popular alignment program that also predicts genes from alignments.

            When I open it in IGB the attached image is displayed. It should have shown a single gene model with CDSs.

              Attachments

                Issue Links

                relates to

                Task - A task that needs to be done. BUG-622 File format issues

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

                  Ascending order - Click to sort in descending order
                  ann.loraine Ann Loraine created issue -
                  hiralv Hiral Vora (Inactive) made changes -
                  Field Original Value New Value
                  Project IGB 7.0 [ 10140 ] IGB 7.1 [ 10240 ]
                  Key IGBC-1021 IGBD-251
                  hiralv Hiral Vora (Inactive) made changes -
                  Parent IGBD-250 [ 13875 ]
                  Issue Type Bug [ 1 ] Sub-task [ 5 ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ] Hiral Vora [ hiralv ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Open [ 1 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB 7.1 [ 10240 ] Bug Repository [ 10030 ]
                  Key IGBD-251 BUG-864
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue relates to BUG-622 [ BUG-622 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Tarun Santosh [ tkanapar ]
                  tkanapar Tarun Santosh (Inactive) made changes -
                  Status Reopened [ 4 ] Closed [ 6 ]
                  Resolution Fixed [ 1 ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Tarun Santosh [ tkanapar ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Status Reopened [ 4 ] Closed [ 6 ]
                  Resolution Fixed [ 1 ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      ann.loraine Ann Loraine
                    • Votes:
                      0 Vote for this issue
                      Watchers:
                      0 Start watching this issue

                      Dates

                      • Created:
                        Updated:
                        Resolved: