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  1. IGB
  2. IGBF-1128

Save As... feature appends extra text that can cause the file name to be invalid

        Details

        • Story Points:
          2
        • Sprint:
          Fall 2017

          Description

          While testing IGBF-1092 I noticed that the Save As... feature is not useable at all on Windows. This is because the filename gets appended with additional text causing the file name to be invalid. This is also happening on Mac, but on Mac the filename is not invalid, but the extra text still gets appended.

          For example, if you try to save a graph file as a bedgraph named "test.bedgraph", IGB will actually save the file as "test.bedgraph.*.bedgraph".

          To reproduce:

          1) Select Arabidopsis thaliana genome - go to start screen and click the Arabidopsis image

          2) Choose Data Access > RNA-Seq > Loraine Lab > Mixed Cold > SM > Graph

          3) Select a graph, zoom in on a region

          4) Click Load Data to load some data

          5) Right-click or CNTRL-click track label and select Save As...

          6) Save a file with the name "test.bedgraph"

          Observe: On Mac = the file actually gets saved as test.bedgraph..bedgraph
          On Windows = the file will not be saved at all and there is an exception in the console.

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              Issue Links

              relates to

              Bug - A problem which impairs or prevents the functions of the product. IGBF-1410 Improve file name and file existence checking logic when saving track data

              • Major - Major loss of function.
              • Closed

              Bug - A problem which impairs or prevents the functions of the product. IGBF-1149 default file extension for graph tracks

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

              Bug - A problem which impairs or prevents the functions of the product. IGBF-1162 Duplicate File Extensions shown in the Windows File Chooser "Save as type" drop-down menu

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

              Bug - A problem which impairs or prevents the functions of the product. IGBF-1092 Save As... (bedgraph) feature uses spaces instead of tabs

              • Major - Major loss of function.
              • Closed

              Bug - A problem which impairs or prevents the functions of the product. IGBF-2654 Fix: 'replace' action while saving file

              • Major - Major loss of function.
              • Closed

              Improvement - An improvement or enhancement to an existing feature or task. IGBF-1090 Implement saving of all chromosomes when exporting as bedgraph

              • Major - Major loss of function.
              • Closed

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                  People

                  • Assignee:
                    mason Mason Meyer (Inactive)
                    Reporter:
                    mason Mason Meyer (Inactive)
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                    Dates

                    • Created:
                      Updated:
                      Resolved: