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  1. IGB
  2. IGBF-2102

Fix information icon functionality for non-quickload data sources

        Details

        • Story Points:
          1
        • Epic Link:
        • Sprint:
          Fall 6 : 28 Oct to 8 Nov, Fall 7 : 11 Nov to 22 Nov, Fall 8 : 25 Nov to 6 Dec

          Description

          I ran across an bug where, with IGB in a naive state, enabling the UCSC data source of type DAS and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - click events do not result in any behavior, and the exception thrown in the console is shown in the screenshot. The same occurs for the UofUtahBioinfCore data source of type DAS2.

          The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other enabled data source types, or support for these data sources should be extended with additional logic.

          Discovered on macOS high sierra.

            Attachments

              Issue Links

              relates to

              Sub-task - The sub-task of the issue IGBF-1507 Develop User Interface for showing Quickload site details

              • Major - Major loss of function.
              • Closed

              Sub-task - The sub-task of the issue IGBF-1508 Implement business logic for showing Quickload site information

              • Major - Major loss of function.
              • Closed

              Story - Created by JIRA Software - do not edit or delete. Issue type for a user story. IGBF-1506 Add feature to show details about Quickload Site in Data Source tab of Preference window

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. REL-12 Verify functionality of the data provider subsystem

              • Major - Major loss of function.
              • Testing Complete

                Activity

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                pbadzuh Philip Badzuh (Inactive) created issue -
                pbadzuh Philip Badzuh (Inactive) made changes -
                Field Original Value New Value
                Link This issue relates to IGBF-1506 [ IGBF-1506 ]
                pbadzuh Philip Badzuh (Inactive) made changes -
                Link This issue relates to IGBF-1507 [ IGBF-1507 ]
                pbadzuh Philip Badzuh (Inactive) made changes -
                Link This issue relates to IGBF-1508 [ IGBF-1508 ]
                pbadzuh Philip Badzuh (Inactive) made changes -
                Epic Link IGBF-1765 [ 17855 ]
                pbadzuh Philip Badzuh (Inactive) made changes -
                Description I'm not sure if DAS type data sources were accounted for when making the information column in the Data Sources window - or if their support is planned for the future - but I ran across an bug where, when clicking on the information icon for the UCSC data source, the icon disappears and the data source is set to 'enabled'. The Data Sources table then becomes unusable, even after closing the Preferences window and opening it up again.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.                 		I'm not sure if DAS type data sources were accounted for when making the information column in the Data Sources window - or if their support is planned for the future - but I ran across an bug where, with IGB in a naive state, enabling the UCSC data source and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - no clicks events result in any behavior, and the console errors are shown in the screenshot.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.
                pbadzuh Philip Badzuh (Inactive) made changes -
                Description I'm not sure if DAS type data sources were accounted for when making the information column in the Data Sources window - or if their support is planned for the future - but I ran across an bug where, with IGB in a naive state, enabling the UCSC data source and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - no clicks events result in any behavior, and the console errors are shown in the screenshot.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.                 		I'm not sure if DAS type data sources were accounted for when making the information column in the Data Sources window - or if their support is planned for the future - but I ran across an bug where, with IGB in a naive state, enabling the UCSC data source and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - no clicks events result in any behavior, and the exception thrown in the console is shown in the screenshot.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.
                pbadzuh Philip Badzuh (Inactive) made changes -
                Summary Fix information window error for DAS type data sources Fix information icon functionality for non-quickload data sources
                pbadzuh Philip Badzuh (Inactive) made changes -
                Description I'm not sure if DAS type data sources were accounted for when making the information column in the Data Sources window - or if their support is planned for the future - but I ran across an bug where, with IGB in a naive state, enabling the UCSC data source and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - no clicks events result in any behavior, and the exception thrown in the console is shown in the screenshot.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.                 		I ran across an bug where, with IGB in a naive state, enabling the UCSC data source of type DAS and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - no clicks events result in any behavior, and the exception thrown in the console is shown in the screenshot. The same occurs for the UofUtahBioinfCore data source of type DAS2.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other enabled data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.
                pbadzuh Philip Badzuh (Inactive) made changes -
                Description I ran across an bug where, with IGB in a naive state, enabling the UCSC data source of type DAS and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - no clicks events result in any behavior, and the exception thrown in the console is shown in the screenshot. The same occurs for the UofUtahBioinfCore data source of type DAS2.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other enabled data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.                 		I ran across an bug where, with IGB in a naive state, enabling the UCSC data source of type DAS and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - no click events result in any behavior, and the exception thrown in the console is shown in the screenshot. The same occurs for the UofUtahBioinfCore data source of type DAS2.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other enabled data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.
                pbadzuh Philip Badzuh (Inactive) made changes -
                Description I ran across an bug where, with IGB in a naive state, enabling the UCSC data source of type DAS and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - no click events result in any behavior, and the exception thrown in the console is shown in the screenshot. The same occurs for the UofUtahBioinfCore data source of type DAS2.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other enabled data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.                 		I ran across an bug where, with IGB in a naive state, enabling the UCSC data source of type DAS and clicking its information icon results in the Data Sources table becoming unusable, even after closing the Preferences window and opening it up again - click events do not result in any behavior, and the exception thrown in the console is shown in the screenshot. The same occurs for the UofUtahBioinfCore data source of type DAS2.

                The information window seems to have been developed for quickload data source types, so the info icon should either not be present for other enabled data source types, or support for these data sources should be extended with additional logic.

                Discovered on macOS high sierra.
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                ann.loraine Ann Loraine added a comment -

                Great catch Philip Badzuh !

                Show
                ann.loraine Ann Loraine added a comment - Great catch Philip Badzuh !
                pbadzuh Philip Badzuh (Inactive) made changes -
                Link This issue relates to REL-12 [ REL-12 ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 6 : 28 Oct to 8 Nov [ 77 ] Fall 6 : 28 Oct to 8 Nov, Fall 7 : 11 Nov to 22 Nov [ 77, 78 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                shamika Shamika Gajanan Kulkarni (Inactive) made changes -
                Assignee Shamika Gajanan Kulkarni [ shamika ]
                shamika Shamika Gajanan Kulkarni (Inactive) made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                shamika Shamika Gajanan Kulkarni (Inactive) made changes -
                Assignee Shamika Gajanan Kulkarni [ shamika ] Philip Badzuh [ pbadzuh ]
                pbadzuh Philip Badzuh (Inactive) made changes -
                Attachment das_dataProvider.png [ 14497 ]
                Attachment quickload_dataProvider.png [ 14498 ]
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                pbadzuh Philip Badzuh (Inactive) added a comment -

                Shamika Gajanan Kulkarni and I have a working fix at: https://bitbucket.org/pbadzuh/igb_pbdev/branch/IGBF-2102#diff

                Show
                pbadzuh Philip Badzuh (Inactive) added a comment - Shamika Gajanan Kulkarni and I have a working fix at: https://bitbucket.org/pbadzuh/igb_pbdev/branch/IGBF-2102#diff
                pbadzuh Philip Badzuh (Inactive) made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                pbadzuh Philip Badzuh (Inactive) made changes -
                Assignee Philip Badzuh [ pbadzuh ]
                ann.loraine Ann Loraine made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                Hide
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                ann.loraine Ann Loraine added a comment -

                This looks great. Please submit PR. We will merge and then test.

                For testing, try to:

                • open a file from desktop
                • open a file from Galaxy (shows up as "local" in the tree view in Available Data Sets)
                Show
                ann.loraine Ann Loraine added a comment - This looks great. Please submit PR. We will merge and then test. For testing, try to: open a file from desktop open a file from Galaxy (shows up as "local" in the tree view in Available Data Sets)
                ann.loraine Ann Loraine made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                Hide
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                pbadzuh Philip Badzuh (Inactive) added a comment -

                Please see the PR here: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/754/igbf-2102/diff

                Show
                pbadzuh Philip Badzuh (Inactive) added a comment - Please see the PR here: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/754/igbf-2102/diff
                pbadzuh Philip Badzuh (Inactive) made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                ann.loraine Ann Loraine made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                ann.loraine Ann Loraine made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
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                ann.loraine Ann Loraine added a comment -

                Merged and master branch installers are built and available from Downloads and from BioViz early release page.

                Show
                ann.loraine Ann Loraine added a comment - Merged and master branch installers are built and available from Downloads and from BioViz early release page.
                prutha Prutha Kulkarni (Inactive) made changes -
                Assignee Prutha Kulkarni [ prutha ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 6 : 28 Oct to 8 Nov, Fall 7 : 11 Nov to 22 Nov [ 77, 78 ] Fall 6 : 28 Oct to 8 Nov, Fall 7 : 11 Nov to 22 Nov, Fall 8 : 25 Nov to 6 Dec [ 77, 78, 79 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                prutha Prutha Kulkarni (Inactive) made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
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                prutha Prutha Kulkarni (Inactive) added a comment -

                Tested the fix using the branch installer. It's working fine. Submitting it to DONE.

                Show
                prutha Prutha Kulkarni (Inactive) added a comment - Tested the fix using the branch installer. It's working fine. Submitting it to DONE.
                prutha Prutha Kulkarni (Inactive) made changes -
                Assignee Prutha Kulkarni [ prutha ] Philip Badzuh [ pbadzuh ]
                prutha Prutha Kulkarni (Inactive) made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                  People

                  • Assignee:
                    pbadzuh Philip Badzuh (Inactive)
                    Reporter:
                    pbadzuh Philip Badzuh (Inactive)
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                    Dates

                    • Created:
                      Updated:
                      Resolved: