Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None
    • Story Points:
      2
    • Sprint:
      Fall 7 : 11 Nov to 22 Nov, Fall 8 : 25 Nov to 6 Dec

      Description

      Situation: The current implementation of index hacking produces a bedgraph file that is written to the same location as the bai file. As this requires write access, it is not possible to load a bai file from a URL.

      Task: This issue is blocked by IGBF-2101, which will create a graph sym object from the BAI file without having to write out a bedgraph file first. For this issue, investigate and implement any additional changes required to enable loading a BAI file from a URL.

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            svallapu Sai Charan Reddy Vallapureddy added a comment -

            It is fixed in IGBF-2101

            Show
            svallapu Sai Charan Reddy Vallapureddy added a comment - It is fixed in IGBF-2101
            Hide
            svallapu Sai Charan Reddy Vallapureddy added a comment -

            Pull Request submitted. Check IGBF-2101

            Show
            svallapu Sai Charan Reddy Vallapureddy added a comment - Pull Request submitted. Check IGBF-2101
            Hide
            nfreese Nowlan Freese added a comment -

            Check comments for IGBF-2101.

            Loaded correctly from URL (with exception of some pacbio files).

            Closing issue.

            Show
            nfreese Nowlan Freese added a comment - Check comments for IGBF-2101 . Loaded correctly from URL (with exception of some pacbio files). Closing issue.

              People

              • Assignee:
                svallapu Sai Charan Reddy Vallapureddy
                Reporter:
                nfreese Nowlan Freese
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                Dates

                • Created:
                  Updated:
                  Resolved: