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  1. IGB
  2. IGBF-2303

Investigate: New version of ProtAnnot not getting installed by App Store

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
    • Story Points:
      1
    • Sprint:
      Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May, Spring 9 : 25 May to 8 Jun, Summer 1: 8 Jun - 19 Jun

      Description

      I uploaded and released a new version (9.1.2) of ProtAnnot.

      However, when I try to install it, I am not able to.

      If I launch IGB (9.1.2 or 9.1.0) and then open the protannot page (https://apps.bioviz.org/apps/org.lorainelab.igb.protannot) the page does not show an "Install" button even though IGB is open and running. The other App pages do show the "Install" button, however.

      The IGB App Manager is also not allowing me to install the new version of the App. Weirdly, the correct App description is being shown in App Manager, however!

      Tip:

      See: https://bitbucket.org/lorainelab/integrated-genome-browser/src/master/plugins/AppStore/src/main/java/org/lorainelab/igb/appstore/IgbAppServerLauncher.java for details on how to connect to the IGB localhost port that is being used by App Store javascript.

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            Hide
            aloraine Ann Loraine added a comment -
            Show
            aloraine Ann Loraine added a comment - Links: ProtAnnot repo - https://bitbucket.org/lorainelab/protannot/src/master/ jar file uploaded to App Store for new release - https://bitbucket.org/lorainelab/protannot/downloads/protannot-9.1.2.jar
            Hide
            aloraine Ann Loraine added a comment -

            Possibly out-of-date documentation describing IGB "manageApp" endpoint:

            Show
            aloraine Ann Loraine added a comment - Possibly out-of-date documentation describing IGB "manageApp" endpoint: https://docs.google.com/document/d/1FZoZmN603b2bCVVjAU2gS5i8DKG5qutagwkvPQZ0T48/edit?usp=sharing
            Hide
            pooja.nikhare Pooja Nikhare (Inactive) added a comment -

            I tested on dev-appstore-2 , using the following :
            IGB installer: IGBF-2192 from Noor's Repo - https://bitbucket.org/noorzahara/integrated-genome-browser-local1/downloads/
            Protonot App versions: https://bitbucket.org/lorainelab/protannot/downloads/

            • I Submitted Protonot Apps 9.1.2 version. In IGB app manager I was able to see "Update" button and the latest App description was updated.
            • In app-store I could see an upgrade button.
            • After installing the Protonot latest app. Selected sym and tools -> start Protonot . The properties tab was automatically selected. After clicking outside of sym also kept the Properties tab selected (changes related to new app version).

            Same testing I did with IGB - master installer - https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/
            The issues mentioned in the ticket persisted. I suppose the changes are required in IGB.

            Show
            pooja.nikhare Pooja Nikhare (Inactive) added a comment - I tested on dev-appstore-2 , using the following : IGB installer: IGBF-2192 from Noor's Repo - https://bitbucket.org/noorzahara/integrated-genome-browser-local1/downloads/ Protonot App versions: https://bitbucket.org/lorainelab/protannot/downloads/ I Submitted Protonot Apps 9.1.2 version. In IGB app manager I was able to see "Update" button and the latest App description was updated. In app-store I could see an upgrade button. After installing the Protonot latest app. Selected sym and tools -> start Protonot . The properties tab was automatically selected. After clicking outside of sym also kept the Properties tab selected (changes related to new app version). Same testing I did with IGB - master installer - https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/ The issues mentioned in the ticket persisted. I suppose the changes are required in IGB.
            Hide
            aloraine Ann Loraine added a comment - - edited

            Problem solved by merging PR mentioned in above comment.
            Doing bug fix release - IGB 9.1.4.

            Show
            aloraine Ann Loraine added a comment - - edited Problem solved by merging PR mentioned in above comment. Doing bug fix release - IGB 9.1.4.
            Hide
            aloraine Ann Loraine added a comment -

            In doing 9.1.4 release, noticed that Mac installers are no longer working.
            We are investigating.
            Testing this ticket should be postponed pending resolution of Mac installer issue. (See linked issues.)

            Show
            aloraine Ann Loraine added a comment - In doing 9.1.4 release, noticed that Mac installers are no longer working. We are investigating. Testing this ticket should be postponed pending resolution of Mac installer issue. (See linked issues.)
            Hide
            aloraine Ann Loraine added a comment -

            Mac installers are working now. Ready for testing.

            Show
            aloraine Ann Loraine added a comment - Mac installers are working now. Ready for testing.
            Hide
            pbadzuh Philip Badzuh added a comment -

            Using the latest IGB installer, built from the master branch, these are the testing results on macOS:

            • The 'install' button is available on the appstore for the protannot app
            • Clicking the above button successfully installs protannot in IGB
            • The app description shown in app manager matches that of appstore

            Moving to done

            Show
            pbadzuh Philip Badzuh added a comment - Using the latest IGB installer, built from the master branch, these are the testing results on macOS: The 'install' button is available on the appstore for the protannot app Clicking the above button successfully installs protannot in IGB The app description shown in app manager matches that of appstore Moving to done

              People

              • Assignee:
                noor91zahara Noor Zahara
                Reporter:
                aloraine Ann Loraine
              • Votes:
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                Watchers:
                3 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: