Details
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Type:
Improvement
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 9.1.10 Major Release
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Labels:None
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Story Points:1
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Epic Link:
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Sprint:Spring 5 2022 Feb 28 - Mar 11, Spring 6 2022 Mar 14 - Mar 25, Spring 7 2022 Mar 28 - Apr 8
Description
Attachments
Issue Links
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-2831 [ 19524 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Assignee | Philip Badzuh [ pbadzuh ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Sprint | Spring 5 2022 Feb 28 - Mar 11 [ 140 ] | Spring 5 2022 Feb 28 - Mar 11, Spring 6 2022 Mar 14 - Mar 25 [ 140, 141 ] |
| Rank | Ranked higher |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Assignee | Philip Badzuh [ pbadzuh ] |
Please submit PR.
Please see PR here.
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Assignee | Philip Badzuh [ pbadzuh ] |
| Assignee | Ann Loraine [ aloraine ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
Merged. Installers build and deployed to IGB "early access" section of bioviz.org Web site.
| Assignee | Ann Loraine [ aloraine ] |
| Sprint | Spring 5 2022 Feb 28 - Mar 11, Spring 6 2022 Mar 14 - Mar 25 [ 140, 141 ] | Spring 5 2022 Feb 28 - Mar 11, Spring 6 2022 Mar 14 - Mar 25, Spring 7 2022 Mar 28 - Apr 8 [ 140, 141, 142 ] |
| Rank | Ranked higher |
| Assignee | Omkar Marne [ omarne ] |
Followed testing instructions from IGBF-3001 :
I ran the trackhub facade locally and added given URL as an IGB datasource. The given is URL : http://localhost:8000/api/?hubUrl=https://dashr2.lisanwanglab.org/tracks/DASHR2_hub.txt&filePath=/ is unreachable in IGB.
Philip Badzuh Please check.
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Status | Post-merge Testing In Progress [ 10003 ] | To-Do [ 10305 ] |
| Assignee | Omkar Marne [ omarne ] | Philip Badzuh [ pbadzuh ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
Omkar Marne, I am not able to replicate your observation. Are you sure that you are running the correct version of the codebase? Make sure that:
- You are on the
IGBF-3087branch of the IGB repo - Your master branch for the trackhubs repo is up-to-date
- You have run the below for the IGB project:
mvn clean install
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Assignee | Philip Badzuh [ pbadzuh ] | Omkar Marne [ omarne ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
Followed above testing instructions.
The SSL certificate validation issue has been fixed.
Closing the ticket.
| Assignee | Omkar Marne [ omarne ] | Philip Badzuh [ pbadzuh ] |
| Fix Version/s | 9.1.10 Major Release [ 10700 ] |
| Issue Type | Task [ 3 ] | Improvement [ 4 ] |
As described in the comment linked to in the description, it may be possible to entirely avoid this issue if we can determine a way to force IGB to use v3 of X.509. After doing some digging, I was not able to determine what exactly causes IGB to require v2, so to extend the previous fix to this problem, please see my changes here.