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  1. IGB
  2. IGBF-3131

Implement Add Data Source (Quickload) endpoint

    Details

    • Story Points:
      5
    • Sprint:
      Summer 3 2022 June 21, Summer 4 2022 July 4, Summer 5 2022 July 18, Summer 6 2022 Aug 1, Fall 1 2022 Aug 15

      Description

      Situation: We need an endpoint in IGB that can accept a Quickload URL and name and will then add a new data source without input from the user.

      Task: Implement the endpoint in IGB.

      See IGBF-2846 for notes related to this ticket.

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            karthik Karthik Raveendran added a comment - - edited PR Submitted https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/909/igbf-3131-add-data-source-endpoint
            Hide
            ann.loraine Ann Loraine added a comment -

            Merged.

            Show
            ann.loraine Ann Loraine added a comment - Merged.
            Hide
            ann.loraine Ann Loraine added a comment -

            Installers are built. Note: installers are using the old jdk with nonfunctional app manager. New installers will be made pending merge of IGBF-3113 changes.

            Show
            ann.loraine Ann Loraine added a comment - Installers are built. Note: installers are using the old jdk with nonfunctional app manager. New installers will be made pending merge of IGBF-3113 changes.
            Hide
            ann.loraine Ann Loraine added a comment -

            Master branch is built using new Docker image and ready for testing.

            Show
            ann.loraine Ann Loraine added a comment - Master branch is built using new Docker image and ready for testing.
            Hide
            nfreese Nowlan Freese added a comment -

            Tested on MacOS 12.5 using master branch installer.
            Reset preferences to default in IGB and removed .igb folder.

            Able to successfully load data source through the endpoint using this URL: http://127.0.0.1:7085/igbDataSource?quickloadurl=https://data.cyverse.org/dav-anon/iplant/home/shared/BioViz/rnaseq&quickloadname=NOwlanTestT

            Closing ticket.

            Show
            nfreese Nowlan Freese added a comment - Tested on MacOS 12.5 using master branch installer. Reset preferences to default in IGB and removed .igb folder. Able to successfully load data source through the endpoint using this URL: http://127.0.0.1:7085/igbDataSource?quickloadurl=https://data.cyverse.org/dav-anon/iplant/home/shared/BioViz/rnaseq&quickloadname=NOwlanTestT Closing ticket.

              People

              • Assignee:
                karthik Karthik Raveendran
                Reporter:
                nfreese Nowlan Freese
              • Votes:
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                Watchers:
                3 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: