All of the Subsystems have been tested except for the sections reliant on IGBF-3199. That's next on my To-do.
After that I will do a more thorough investigation of these questions:
Protannot
"Verify that the information link directs to the appropriate "About InterPro" page"-404 page not found. redirects to correct page http://www.ebi.ac.uk/interpro/about/interpro/
Search"Select "DMD" from the Quick-search drop-down to navigate to"navigates to "GSDMD" not DMD.
-I believe this is a previous issue. need to search JIRA.
Soft-Clipping: is good to go.
Synonyms: good.
local quickload section still needs testing.
Tabbed Panels: good.
Toolbar: good.
Track Operators - Annotation Tracks
-links to user guide pages are missing 'confluence' domain word in the URL.
-unsure how to test "Find someplace where the matching Find Junctions operation using value 5 and value 10 have different scores. Identify the read(s) that matches that junction, and where where one side of the read is between 5 and 10 bases".
see screenshot
-need to review user guide pages.
Track Operations -Graph Tracks
-need to review user guide pages
-trouble with Single Track Operations part 3, images don't match. see screenshot.
Track View: good.
I will fill in the appropriate checkboxes on Monday.
*all completed*
Use the most recent master branch installer which should have the most recent commit: b20f0769dbffd53bedddaac8bbb8ba173c969bdd from 2022-08-29.
Download page: https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/