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  1. IGB
  2. IGBF-3253

Submit Muday time course data to SRA

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          2
        • Epic Link:
        • Sprint:
          Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Fall 2 2023 Sep 17

          Description

          Purpose:
          To prepare and submit the sequencing data to the SRA for the Muday144 data set.
          There are 144 total sequence files (72 pairs).

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-3498 Review SRA Submissions

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3415 Refer to the F3H over-expression line as VF36-T3 instead of OX3 or OE3

              • Major - Major loss of function.
              • Closed

                Activity

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                robofjoy Robert Reid added a comment -

                Sequence Read Archive (SRA) submission: SUB12365647

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                robofjoy Robert Reid added a comment - Sequence Read Archive (SRA) submission: SUB12365647
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                robofjoy Robert Reid added a comment -

                Original GeneWiz ID = 30-716122143 (Summer 2022)
                This data is likely no longer there of course.

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                robofjoy Robert Reid added a comment - Original GeneWiz ID = 30-716122143 (Summer 2022) This data is likely no longer there of course.
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                robofjoy Robert Reid added a comment -

                Setting the release data for July 1, 2024. (can change easily if desired).

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                robofjoy Robert Reid added a comment - Setting the release data for July 1, 2024. (can change easily if desired).
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                robofjoy Robert Reid added a comment -

                Note: for biosample, need to describe OX3 as "FLAVONOID 3-HYDROXYLASE (F3H)" .

                Need to describe ARE as _________ ? Need to find a proper name if already in literature.

                Show
                robofjoy Robert Reid added a comment - Note: for biosample, need to describe OX3 as "FLAVONOID 3-HYDROXYLASE (F3H)" . Need to describe ARE as _________ ? Need to find a proper name if already in literature.

                  People

                  • Assignee:
                    robofjoy Robert Reid
                    Reporter:
                    ann.loraine Ann Loraine
                  • Votes:
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                    Dates

                    • Created:
                      Updated:
                      Resolved: