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  1. IGB
  2. IGBF-3346

Prepping data and entries for SRA for Muday time course

        Details

        • Type: Task
        • Status: To-Do (View Workflow)
        • Priority: Major
        • Resolution: Unresolved
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          2
        • Epic Link:
        • Sprint:
          Summer 2 2023 May 29, Summer 3 2023 June 12, Summer 6 2023 July 24, Summer 7 2023 Aug 7

          Description

          Starting the data prepping and table prepping for the Muday time course data.

          EXTRA step will be needed due to the labelling errors!!

          A script to rename the files will be needed and this script will need review to ensure we get that step right!

          Otherwise, the SRA submission should be straightforward, similar to IGBF-3255.

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-3406 Re-run Nextflow Muday time course data with SL5 data downloaded from SRA

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3290 Use new sample labels recommended by Muday Lab

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3596 Compare original Muday flavonoid data to SRA Re-run data

              • Major - Major loss of function.
              • Closed

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                  People

                  • Assignee:
                    robofjoy Robert Reid
                    Reporter:
                    robofjoy Robert Reid
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                    Dates

                    • Created:
                      Updated: