Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-3521

Investigate build problem: effective model for org.lorainelab.igb:affymetrix-common:bundle:10.0.0

        Details

          Description

          Building main-JDK21 version generated this warning:

          [WARNING] 
[WARNING] Some problems were encountered while building the effective model for org.lorainelab.igb:affymetrix-common:bundle:10.0.0
[WARNING] 'dependencies.dependency.(groupId:artifactId:type:classifier)' must be unique: org.slf4j:slf4j-api:jar -> duplicate declaration of version (?) @ line 58, column 21
[WARNING] 
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING]

          For this task, investigate and correct the problem that is causing the warning.

          main-JDK21 version:

            Attachments

              Issue Links

              relates to

              Bug - A problem which impairs or prevents the functions of the product. IGBF-3522 Investigate build problem: unknown parameter ignoreChecksumFailure

              • Major - Major loss of function.
              • Closed

              Bug - A problem which impairs or prevents the functions of the product. IGBF-3525 Investigate build problem: SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder"

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3523 Investigate build problem: POM and checksum for com.jidesoft:jide-ultimate-jakarta:jar:3.5.15 is missing, no dependency information available

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3524 Investigate build problem: Bundle org.lorainelab.igb:flatlaf:bundle:10.0.0 : Classes found in the wrong directory

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3508 Create Install4J v10 Docker image for JDK21

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3516 Investigate build problem: repo1/javax/jlfgr/jlfgr/1.0/jlfgr-1.0.jar main-JDK21 warning

              • Major - Major loss of function.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                ann.loraine Ann Loraine created issue -
                ann.loraine Ann Loraine made changes -
                Field Original Value New Value
                Epic Link IGBF-3142 [ 21688 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3516 [ IGBF-3516 ]
                ann.loraine Ann Loraine made changes -
                Summary Investigate: problem building the effective model for org.lorainelab.igb:affymetrix-common:bundle:10.0.0 Investigate build problem: effective model for org.lorainelab.igb:affymetrix-common:bundle:10.0.0
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3522 [ IGBF-3522 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3523 [ IGBF-3523 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3524 [ IGBF-3524 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3525 [ IGBF-3525 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3508 [ IGBF-3508 ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 8 [ 184 ] Spring 1 [ 185 ]
                karthik Karthik Raveendran made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                karthik Karthik Raveendran made changes -
                Assignee Karthik Raveendran [ karthik ]
                karthik Karthik Raveendran made changes -
                Attachment With_Dependency.txt [ 18172 ]
                Attachment Without_Dependency.txt [ 18173 ]
                Hide
                Permalink
                karthik Karthik Raveendran added a comment - - edited

                The above warning was shown because the slf4j-api dependency was declared twice in affymetrix-common. Removed one of them and the warning is gone with no new issues. See commit

                Show
                karthik Karthik Raveendran added a comment - - edited The above warning was shown because the slf4j-api dependency was declared twice in affymetrix-common. Removed one of them and the warning is gone with no new issues. See commit
                karthik Karthik Raveendran made changes -
                Assignee Karthik Raveendran [ karthik ]
                karthik Karthik Raveendran made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 1 [ 185 ] Spring 1, Spring 2 [ 185, 186 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                Hide
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                nfreese Nowlan Freese added a comment -

                Tested locally. IGB is working and the warning is no longer present.

                Ready for pull request.

                Show
                nfreese Nowlan Freese added a comment - Tested locally. IGB is working and the warning is no longer present. Ready for pull request.
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                nfreese Nowlan Freese made changes -
                Assignee Karthik Raveendran [ karthik ]
                Hide
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                karthik Karthik Raveendran added a comment -

                PR Submitted: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/972

                Show
                karthik Karthik Raveendran added a comment - PR Submitted: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/972
                karthik Karthik Raveendran made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                karthik Karthik Raveendran made changes -
                Assignee Karthik Raveendran [ karthik ]
                Hide
                Permalink
                ann.loraine Ann Loraine added a comment -

                Merged. New installers built and ready for testing. See: https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/

                Show
                ann.loraine Ann Loraine added a comment - Merged. New installers built and ready for testing. See: https://bitbucket.org/lorainelab/integrated-genome-browser/downloads/
                ann.loraine Ann Loraine made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                ann.loraine Ann Loraine made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                nfreese Nowlan Freese made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                nfreese Nowlan Freese made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
                nfreese Nowlan Freese made changes -
                Assignee Karthik Raveendran [ karthik ]
                pkulzer Paige Kulzer made changes -
                Fix Version/s 10.0.0 Major Release [ 10900 ]
                nfreese Nowlan Freese made changes -
                Issue Type Task [ 3 ] Bug [ 1 ]

                  People

                  • Assignee:
                    karthik Karthik Raveendran
                    Reporter:
                    ann.loraine Ann Loraine
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    3 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: