Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-3525

Investigate build problem: SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder"

        Details

          Description

          IGB tests trigger this warning when building main-JDK21 using Docker image:

          SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
SLF4J: Defaulting to no-operation (NOP) logger implementation
SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details.
SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
SLF4J: Defaulting to no-operation (NOP) logger implementation
SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details.
Dec 13, 2023 3:56:47 PM com.affymetrix.genometry.parsers.graph.BarParser getSeqGroup
WARNING: Did not find genomeVersion Test Group:Test Group.  Adding it as new genomeVersion
Dec 13, 2023 3:56:48 PM com.affymetrix.genometry.parsers.NibbleResiduesParser parse

          For this task, determine the source of the issue and fix it. Also check to see if this is a new error, as it may also occur in main-JDK8. If so, we can probably safely ignore it for now.

          IGB and Docker image version info:

          Docker file used to build the container was: https://bitbucket.org/lorainelab/integrated-genome-browser-docker/raw/d26649c086c8c2cc252e8a18b6e2ca3a74413f0b/Dockerfile

          The version of IGB built was: a0860834e (HEAD -> main-JDK21, origin/main-JDK21) removing mac specific code for the right aligned tabs to ensure vertical override is applied

            Attachments

              Issue Links

              relates to

              Bug - A problem which impairs or prevents the functions of the product. IGBF-3521 Investigate build problem: effective model for org.lorainelab.igb:affymetrix-common:bundle:10.0.0

              • Major - Major loss of function.
              • Closed

              Bug - A problem which impairs or prevents the functions of the product. IGBF-3522 Investigate build problem: unknown parameter ignoreChecksumFailure

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3508 Create Install4J v10 Docker image for JDK21

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3516 Investigate build problem: repo1/javax/jlfgr/jlfgr/1.0/jlfgr-1.0.jar main-JDK21 warning

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3523 Investigate build problem: POM and checksum for com.jidesoft:jide-ultimate-jakarta:jar:3.5.15 is missing, no dependency information available

              • Major - Major loss of function.
              • Closed

                Activity

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                ann.loraine Ann Loraine created issue -
                ann.loraine Ann Loraine made changes -
                Field Original Value New Value
                Epic Link IGBF-3142 [ 21688 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3516 [ IGBF-3516 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3521 [ IGBF-3521 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3522 [ IGBF-3522 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3523 [ IGBF-3523 ]
                ann.loraine Ann Loraine made changes -
                Summary Investigate build problem: logging Investigate build problem: SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder"
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3508 [ IGBF-3508 ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 8 [ 184 ] Fall 8, Spring 1 [ 184, 185 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Sprint Fall 8, Spring 1 [ 184, 185 ] Fall 8, Spring 1, Spring 2 [ 184, 185, 186 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                nfreese Nowlan Freese made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                ann.loraine Ann Loraine made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                ann.loraine Ann Loraine made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                nfreese Nowlan Freese made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                nfreese Nowlan Freese made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                pkulzer Paige Kulzer (Inactive) made changes -
                Fix Version/s 10.0.0 Major Release [ 10900 ]
                nfreese Nowlan Freese made changes -
                Issue Type Task [ 3 ] Bug [ 1 ]

                  People

                  • Assignee:
                    nfreese Nowlan Freese
                    Reporter:
                    ann.loraine Ann Loraine
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                    Dates

                    • Created:
                      Updated:
                      Resolved: