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  1. IGB
  2. IGBF-3597

Investigate error that occurs when loading URLs via a script on Windows

    Details

      Description

      An error is occurring when loading URLs into IGB via a script on Windows. Based on the IGB Log, it looks as though IGB is reading in the ":" character as a "-" in the URLs from the script.

      This error is occurring in both IGB 9.1.10 and 10.0.0 on Windows. This script does work on Mac, which is why I suspect it's specific to Windows, but I have not tried to reproduce it on Linux.

      See attached for a copy of the script (StressTest.igb) that can be used to reproduce this error, as well as a screenshot of the error that pops up (UnableToFindURL.png) and the IGB Log (Log_UnableToFindURLError).

        Attachments

        1. A_thaliana_Jun_2009_Chr1.bam
          143 kB
        2. A_thaliana_Jun_2009_Chr1.bam.bai
          0.1 kB
        3. commandSocketTest.sh
          0.4 kB
        4. Log_UnableToFindURLError
          17 kB
        5. nowlanTest.igb
          0.1 kB
        6. StressTest_quickload.igb
          4 kB
        7. StressTest.igb
          5 kB
        8. UnableToFindURL.png
          UnableToFindURL.png
          17 kB

          Issue Links

            Activity

            Hide
            kgopu Kaushik Gopu added a comment - - edited

            PR has been submitted.

            Show
            kgopu Kaushik Gopu added a comment - - edited PR has been submitted.
            Hide
            ann.loraine Ann Loraine added a comment -

            PR is merged. Thank you Kaushik Gopu!

            Show
            ann.loraine Ann Loraine added a comment - PR is merged. Thank you Kaushik Gopu !
            Hide
            ann.loraine Ann Loraine added a comment -

            Installers are built and deployed to the team repo Downloads section and to the bioviz.org "early access" page.

            Ready for testing.

            attn:

            Paige Kulzer
            Nowlan Freese

            Show
            ann.loraine Ann Loraine added a comment - Installers are built and deployed to the team repo Downloads section and to the bioviz.org "early access" page. Ready for testing. attn: Paige Kulzer Nowlan Freese
            Hide
            nfreese Nowlan Freese added a comment -

            Tested main-JDK21-with-javafx-no-theme from loraine lab repository on Windows 10 using the script in my previous comment, script worked correctly.

            Show
            nfreese Nowlan Freese added a comment - Tested main-JDK21-with-javafx-no-theme from loraine lab repository on Windows 10 using the script in my previous comment, script worked correctly.
            Hide
            pkulzer Paige Kulzer added a comment -

            I've also tested main-JDK21-with-javafx-no-theme from loraine lab repository on Windows 10 using the StressTest.igb and nowlanTest.igb scripts, both worked as anticipated. Marking this as closed.

            Show
            pkulzer Paige Kulzer added a comment - I've also tested main-JDK21-with-javafx-no-theme from loraine lab repository on Windows 10 using the StressTest.igb and nowlanTest.igb scripts, both worked as anticipated. Marking this as closed.

              People

              • Assignee:
                kgopu Kaushik Gopu
                Reporter:
                pkulzer Paige Kulzer
              • Votes:
                0 Vote for this issue
                Watchers:
                4 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: