Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      Create a new module ensembl-rest-api-service for adding the Ensembl data provider. Add all the base classes that has to be present for a DataProvider

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          jsirigin Jaya Sravani Sirigineedi added a comment -

          Created a new module ensembl-rest-api-service for adding the Ensembl data provider. Added all the base classes that have to be present for a DataProvider. The application builds successfully without any errors. Updated code is at: https://bitbucket.org/jaya-sravani/integrated-genome-browser/branch/IGBF-3776. As there is no API integration yet, you won't see any data related to Ensembl in IGB. The only way to test this ticket is to clone the branch and build in your local to see whether IGB is built successfully and the application works like before without any errors.

          Show
          jsirigin Jaya Sravani Sirigineedi added a comment - Created a new module ensembl-rest-api-service for adding the Ensembl data provider. Added all the base classes that have to be present for a DataProvider. The application builds successfully without any errors. Updated code is at: https://bitbucket.org/jaya-sravani/integrated-genome-browser/branch/IGBF-3776 . As there is no API integration yet, you won't see any data related to Ensembl in IGB. The only way to test this ticket is to clone the branch and build in your local to see whether IGB is built successfully and the application works like before without any errors.
          Hide
          nfreese Nowlan Freese added a comment -

          Tested on Mac using Sravani's branch.

          Built IGB with tests successfully. Started IGB successfully. Ensembl REST shows in the Data Sources tab.

          Code looks good.

          Ready for pull request.

          Show
          nfreese Nowlan Freese added a comment - Tested on Mac using Sravani's branch. Built IGB with tests successfully. Started IGB successfully. Ensembl REST shows in the Data Sources tab. Code looks good. Ready for pull request.
          Show
          jsirigin Jaya Sravani Sirigineedi added a comment - Created a pull request: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/1023
          Hide
          ann.loraine Ann Loraine added a comment - - edited

          PR is merged. Installers are built and deployed to bioviz.org.

          Show
          ann.loraine Ann Loraine added a comment - - edited PR is merged. Installers are built and deployed to bioviz.org.
          Hide
          nfreese Nowlan Freese added a comment -

          Tested with main branch installer on Mac.

          Ensembl data provider appears in the Data Sources tab. No warnings or errors in the log.

          Closing ticket.

          Show
          nfreese Nowlan Freese added a comment - Tested with main branch installer on Mac. Ensembl data provider appears in the Data Sources tab. No warnings or errors in the log. Closing ticket.

            People

            • Assignee:
              jsirigin Jaya Sravani Sirigineedi
              Reporter:
              jsirigin Jaya Sravani Sirigineedi
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              Dates

              • Created:
                Updated:
                Resolved: