Details
-
Type:
Task
-
Status: Closed (View Workflow)
-
Priority:
Major
-
Resolution: Done
-
Affects Version/s: None
-
Fix Version/s: None
-
Labels:None
-
Story Points:1
-
Epic Link:
-
Sprint:Summer 2, Summer 3, Summer 4
Description
Create a new module ensembl-rest-api-service for adding the Ensembl data provider. Add all the base classes that has to be present for a DataProvider
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-3555 [ 22774 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Description | Create a new module ensembl-rest-api-service for adding the Ensembl data provider. | Create a new module ensembl-rest-api-service for adding the Ensembl data provider. Add all the base classes that has to be present for a DataProvider |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Jaya Sravani Sirigineedi [ jsirigin ] |
| Issue Type | Bug [ 1 ] | Task [ 3 ] |
| Sprint | Summer 2 [ 196 ] | Summer 2, Summer 3 [ 196, 197 ] |
| Rank | Ranked higher |
| Assignee | Nowlan Freese [ nfreese ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
Tested on Mac using Sravani's branch.
Built IGB with tests successfully. Started IGB successfully. Ensembl REST shows in the Data Sources tab.
Code looks good.
Ready for pull request.
| Assignee | Nowlan Freese [ nfreese ] | Jaya Sravani Sirigineedi [ jsirigin ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
Created a pull request: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/1023
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Assignee | Jaya Sravani Sirigineedi [ jsirigin ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
PR is merged. Installers are built and deployed to bioviz.org.
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Sprint | Summer 2, Summer 3 [ 196, 197 ] | Summer 2, Summer 3, Summer 4 [ 196, 197, 198 ] |
| Rank | Ranked higher |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
Tested with main branch installer on Mac.
Ensembl data provider appears in the Data Sources tab. No warnings or errors in the log.
Closing ticket.
| Assignee | Jaya Sravani Sirigineedi [ jsirigin ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
Created a new module ensembl-rest-api-service for adding the Ensembl data provider. Added all the base classes that have to be present for a DataProvider. The application builds successfully without any errors. Updated code is at: https://bitbucket.org/jaya-sravani/integrated-genome-browser/branch/IGBF-3776. As there is no API integration yet, you won't see any data related to Ensembl in IGB. The only way to test this ticket is to clone the branch and build in your local to see whether IGB is built successfully and the application works like before without any errors.