Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Fall 2, Fall 3
Description
Implement logic to load the available chromosomes for the selected genome from Ensembl API.
To get the chromosome list:
GET info/assembly/:species
API to get the list of chromosomes for a selected species: https://rest.ensembl.org/documentation/info/assembly_info
Example: https://rest.ensembl.org/info/assembly/homo_sapiens?content-type=application/json
the top_level_region has all the chromosomes, name and length would be enough to get the assembly info.
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-3555 [ 22774 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Sprint | Summer 5 [ 199 ] |
| Sprint | Summer 6 [ 200 ] |
| Rank | Ranked higher |
| Sprint | Summer 6 [ 200 ] | Summer 7 [ 201 ] |
| Sprint | Summer 7 [ 201 ] | Fall 1 [ 202 ] |
| Sprint | Fall 1 [ 202 ] | Fall 2 [ 203 ] |
| Sprint | Fall 2 [ 203 ] | Fall 2, Fall 3 [ 203, 204 ] |
| Rank | Ranked higher |
| Sprint | Fall 2, Fall 3 [ 203, 204 ] | Fall 2, Fall 3, Fall 4 [ 203, 204, 205 ] |
| Rank | Ranked higher |
| Sprint | Fall 2, Fall 3, Fall 4 [ 203, 204, 205 ] | Fall 2, Fall 3, Fall 5 [ 203, 204, 206 ] |
| Sprint | Fall 2, Fall 3, Fall 5 [ 203, 204, 206 ] | Fall 2, Fall 3, Fall 6 [ 203, 204, 207 ] |
| Sprint | Fall 2, Fall 3, Fall 6 [ 203, 204, 207 ] | Fall 2, Fall 3 [ 203, 204 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |