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  1. IGB
  2. IGBF-3330

Add mm39 (GRCm39) mouse genome to IGB

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          2
        • Epic Link:
        • Sprint:
          Summer 2 2023 May 29, Summer 3 2023 June 12, Summer 4 2023 June 26

          Description

          Situation: A user has asked if we have the GRCm39 (mm39) mouse genome in IGB. We do not support it through Quickloads, but it is available through the UCSC DAS data source.

          Task: Add the GRCm39 (mm39) genome and annotation to IGB.

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-1617 Update human genome annotation

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3362 Add rn7 rat genome to IGB

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

              Task - A task that needs to be done. IGBF-3361 Add galGal5 and galGal6 chicken genome to IGB

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • To-Do

              Task - A task that needs to be done. IGBF-3363 Investigate psl off by one error

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • To-Do

              Updated Genome - After a genome has been updated and committed to SVN IGBF-753 Add new zebrafish genome

              • Major - Major loss of function.
              • Closed

              Updated Genome - After a genome has been updated and committed to SVN IGBF-2952 Add UCSC dm6 fruit fly genome and annotation to IGB

              • Major - Major loss of function.
              • Closed

                Activity

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                  People

                  • Assignee:
                    nfreese Nowlan Freese
                    Reporter:
                    nfreese Nowlan Freese
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                    Dates

                    • Created:
                      Updated:
                      Resolved: