Updated Genome
- [IGBF-2696] - Add blacklist regions to IGB quickload for mouse, human, fruit fly
- [IGBF-2952] - Add UCSC dm6 fruit fly genome and annotation to IGB
- [IGBF-3068] - Enable DAS by default
Bug
- [IGBF-1410] - Improve file name and file existence checking logic when saving track data
- [IGBF-2370] - Investigate IGB certificate dialog box option selection problems
- [IGBF-2654] - Fix: 'replace' action while saving file
- [IGBF-3104] - Investigate IGB crash on MacOS
- [IGBF-3126] - Investigate Monterrey upgrade problem
- [IGBF-3130] - Investigate trust following certificate modal
New Feature
- [IGBF-3131] - Implement Add Data Source (Quickload) endpoint
Task
- [IGBF-2846] - Investigate: Create Add Data Source (Quickload) endpoint
- [IGBF-2992] - Test: Create an intron glyph for genoviz-sdk (ArrowHeadGlyph)
- [IGBF-3113] - Make new Docker image with version 9 Install4J and Zulu JDKs to build IGB
- [IGBF-3118] - Create new JRE bundle for Windows installer
- [IGBF-3124] - Create new JRE bundle for Linux installer
- [IGBF-3146] - Remove "useq" packages from genometry bundle in IGB
- [IGBF-3183] - Fix BioViz Connect file with no attached metadata leads to error
- [IGBF-3208] - Fix: Linux save file not adding file extension to saved tracks or sessions
- [IGBF-3210] - Ensure that scidas URLs are primary quickload's for default IGB quickloads
Improvement
- [IGBF-2911] - Handle araTha1 synonym in track hub facade
- [IGBF-2944] - Update annots.xml url validation and filetype determination for trackhubs
- [IGBF-2957] - Remove text from empty "Add" data source interface
- [IGBF-2978] - Improve bigBed parsing
- [IGBF-2983] - Fix bookmark file name appearance in IGB
- [IGBF-3001] - Handle data sources with improper SSL certificates
- [IGBF-3008] - Improve bookmark interface
- [IGBF-3032] - Change default name for bookmarks
- [IGBF-3087] - Fix custom SSL certificate validation
- [IGBF-3136] - Remove modal from IGBTrustManager
- [IGBF-3140] - Fix App Manager problem with Zulu Java8 JDK
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