Release Notes - IGB - Version 9.1.10 Major Release - HTML format

Updated Genome

  • [IGBF-2696] - Add blacklist regions to IGB quickload for mouse, human, fruit fly
  • [IGBF-2952] - Add UCSC dm6 fruit fly genome and annotation to IGB
  • [IGBF-3068] - Enable DAS by default

Bug

  • [IGBF-1410] - Improve file name and file existence checking logic when saving track data
  • [IGBF-2370] - Investigate IGB certificate dialog box option selection problems
  • [IGBF-2654] - Fix: 'replace' action while saving file
  • [IGBF-3104] - Investigate IGB crash on MacOS
  • [IGBF-3126] - Investigate Monterrey upgrade problem
  • [IGBF-3130] - Investigate trust following certificate modal

New Feature

  • [IGBF-3131] - Implement Add Data Source (Quickload) endpoint

Task

  • [IGBF-2846] - Investigate: Create Add Data Source (Quickload) endpoint
  • [IGBF-2992] - Test: Create an intron glyph for genoviz-sdk (ArrowHeadGlyph)
  • [IGBF-3113] - Make new Docker image with version 9 Install4J and Zulu JDKs to build IGB
  • [IGBF-3118] - Create new JRE bundle for Windows installer
  • [IGBF-3124] - Create new JRE bundle for Linux installer
  • [IGBF-3146] - Remove "useq" packages from genometry bundle in IGB
  • [IGBF-3183] - Fix BioViz Connect file with no attached metadata leads to error
  • [IGBF-3208] - Fix: Linux save file not adding file extension to saved tracks or sessions
  • [IGBF-3210] - Ensure that scidas URLs are primary quickload's for default IGB quickloads

Improvement

  • [IGBF-2911] - Handle araTha1 synonym in track hub facade
  • [IGBF-2944] - Update annots.xml url validation and filetype determination for trackhubs
  • [IGBF-2957] - Remove text from empty "Add" data source interface
  • [IGBF-2978] - Improve bigBed parsing
  • [IGBF-2983] - Fix bookmark file name appearance in IGB
  • [IGBF-3001] - Handle data sources with improper SSL certificates
  • [IGBF-3008] - Improve bookmark interface
  • [IGBF-3032] - Change default name for bookmarks
  • [IGBF-3087] - Fix custom SSL certificate validation
  • [IGBF-3136] - Remove modal from IGBTrustManager
  • [IGBF-3140] - Fix App Manager problem with Zulu Java8 JDK

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